miRBase entry: spu-mir-4853-1

Stem-loop spu-mir-4853-1


Accession
MI0017603
Description
Strongylocentrotus purpuratus spu-mir-4853-1 precursor miRNA
Gene family
MIPF0001972; mir-4853


Sequence

cgggucgaugaggcggUAGCUCCGUUGUUGCGUCUUGGUAggcggugugcguuugcgaucgcgaugucguuagcuucccuuucauugaugcc
.(.((((((((((.((.((((.((..((((((...(.(((((((.....))))))).).))))))..))..)))).)).)))))))))).).

Structure
c g          c  U    -C  UU      UCU G       g 
 g gucgaugagg gg AGCU  CG  GUUGCG   U GUAggcg u
 | |||||||||| || ||||  ||  ||||||   | ||||||| g
 c uaguuacuuu cc ucga  gc  uagcgc   a cguuugc u
c g          c  u    uu  ug      --u g       g 


Annotation confidence Not enough data
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Genome context
KN912998.1: 2687-2778 [+]

Database links

Mature spu-miR-4853

Accession MIMAT0020076
Description Strongylocentrotus purpuratus spu-miR-4853 mature miRNA
Sequence 17 - UAGCUCCGUUGUUGCGUCUUGGUA - 40
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27