miRBase entry: spu-mir-4848b

Stem-loop spu-mir-4848b


Accession
MI0017598
Description
Strongylocentrotus purpuratus spu-mir-4848b precursor miRNA
Gene family
MIPF0001265; mir-4848


Sequence

gacuguUGGGUUGAGGCUUUGGGGCAGGAgcagcagcauccaacguugcaccuaagucugggaaguuuaucgacguugacccu
.......(((((((((((((.(((((((.(((((..........))))).)))..))))..))))))........))))))).

Structure
gacuguU       --------      -G    --   A     agca 
       GGGUUGA        GGCUUU  GGGC  AGG gcagc    u
       |||||||        ||||||  ||||  ||| |||||     
       cccaguu        uugaag  ucug  ucc cguug    c
------u       gcagcuau      gg    aa   a     caac 


Annotation confidence Not enough data
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Genome context
KN913121.1: 823338-823420 [+]

Database links

Mature spu-miR-4848b

Accession MIMAT0020071
Description Strongylocentrotus purpuratus spu-miR-4848b mature miRNA
Sequence 7 - UGGGUUGAGGCUUUGGGGCAGGA - 29
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27