Stem-loop spu-mir-4847

Accession

MI0017596

Description

Strongylocentrotus purpuratus spu-mir-4847 precursor miRNA

Gene family

MIPF0002100; mir-4847

Sequence

uuucaccucaUAAUGAUGGCGCGGUGCGGUGCgaugugauaucaaaaaauucgcucucauucgccaucauucuuagguguagu
...(((((...((((((((((.((((.((.((((................)))).))))))))))))))))...)))))....

Structure

-uuu     caU          C    C  U    ugugaua 
    caccu   AAUGAUGGCG GGUG GG GCga       u
    |||||   |||||||||| |||| || ||||        
    gugga   uuacuaccgc uuac uc cgcu       c
ugau     uuc          -    -  u    uaaaaaa 

Annotation confidence Not enough data

Genome context

KN915731.1: 192364-192446 [-]

Mature spu-miR-4847

• Accession: MIMAT0020069
• Description: Strongylocentrotus purpuratus spu-miR-4847 mature miRNA
• Sequence: 11 - UAAUGAUGGCGCGGUGCGGUGC - 32
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27


2. PubMed ID: 22216218
   RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star
   Kadri S, Hinman VF, Benos PV
   PLoS One (2011) 6:e29217