miRBase entry: sko-mir-4839

Stem-loop sko-mir-4839


Accession
MI0017585
Description
Saccoglossus kowalevskii sko-mir-4839 precursor miRNA


Sequence

auugaguugaUAAGUUUUUCCACUAUAUCUGUGuugacauuaaauccacagauagugguaagacuugaccaacuugug
...((((((.((((((((.((((((..((((((.............)))))))))))).))))))))..))))))...

Structure
auu      -a        U      UA      uugac 
   gaguug  UAAGUUUU CCACUA  UCUGUG     a
   ||||||  |||||||| ||||||  ||||||     u
   uucaac  guucagaa ggugau  agacac     u
gug      ca        u      --      cuaaa 


Annotation confidence Not enough data
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Genome context
GL011044.1: 182970-183047 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sko-mir-4839
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4839

Accession MIMAT0020059
Description Saccoglossus kowalevskii sko-miR-4839 mature miRNA
Sequence 11 - UAAGUUUUUCCACUAUAUCUGUG - 33
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27