miRBase entry: sko-mir-4838

Stem-loop sko-mir-4838


Accession
MI0017584
Description
Saccoglossus kowalevskii sko-mir-4838 precursor miRNA


Sequence

auaaucuguugagguaacugauacaaguaggauugucagauaacauccauaaucUGCUCCUGCUUCUAUCAGUUCCcucggcugauac
...(((.(((((((.((((((((.((((((((..(.(((((..........)))))))))))))).)))))))).))))))).)))..

Structure
aua   u       u        c        uu u     aaca 
   auc guugagg aacugaua aaguagga  g cagau    u
   ||| ||||||| |||||||| ||||||||  | |||||     
   uag cggcucC UUGACUAU UUCGUCCU  C GUcua    c
-ca   u       C        C        -- -     auac 


Annotation confidence Not enough data
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Genome context
GL017468.1: 407582-407669 [-]

Database links

Mature sko-miR-4838

Accession MIMAT0020058
Description Saccoglossus kowalevskii sko-miR-4838 mature miRNA
Sequence 55 - UGCUCCUGCUUCUAUCAGUUCC - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27