miRBase entry: sko-mir-4835

Stem-loop sko-mir-4835


Accession
MI0017580
Description
Saccoglossus kowalevskii sko-mir-4835 precursor miRNA


Sequence

cuugauguucacuuuaAGGUGGCUGGACAGCUUGGUGUguaaacagaauaucaUCAAGCAGUCCAUCCAUCCUUGcaguuaacauucau
...((((((.(((.((((((((.(((((.(((((((((((.......))).)))))))).))))).))).))))).))).))))))...

Structure
cuu      c   u     -   C     A        -   aa 
   gauguu acu uaAGG UGG UGGAC GCUUGGUG Ugu  a
   |||||| ||| ||||| ||| ||||| |||||||| |||  c
   uuacaa uga GUUCC ACC ACCUG CGAACUac aua  a
uac      u   c     U   U     A        u   ag 


Annotation confidence Not enough data
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Genome context
GL015469.1: 154880-154968 [-]

Database links

Mature sko-miR-4835-5p

Accession MIMAT0020051
Description Saccoglossus kowalevskii sko-miR-4835-5p mature miRNA
Sequence 17 - AGGUGGCUGGACAGCUUGGUGU - 38
Evidence experimental
454 [1]

Mature sko-miR-4835-3p

Accession MIMAT0020052
Description Saccoglossus kowalevskii sko-miR-4835-3p mature miRNA
Sequence 54 - UCAAGCAGUCCAUCCAUCCUUG - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27