miRBase entry: sko-mir-4834

Stem-loop sko-mir-4834


Accession
MI0017579
Description
Saccoglossus kowalevskii sko-mir-4834 precursor miRNA


Sequence

ccuugccuugcuacacuucacgcugcaugcuauugcuuauaccucucaACAGCUGCUACGUGGAGUGGAgcaguguacca
...(((.(((((.(((((((((..(((.(((.(((...........))).))))))..))))))))).))))).)))...

Structure
ccu   c     a         cu   u   a   cuua 
   ugc uugcu cacuucacg  gca gcu uug    u
   ||| ||||| |||||||||  ||| ||| |||    a
   aug gacgA GUGAGGUGC  CGU CGA Aac    c
acc   u     G         AU   -   C   ucuc 


Annotation confidence Not enough data
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Genome context
GL012876.1: 115381-115460 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sko-mir-4834
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4834

Accession MIMAT0020050
Description Saccoglossus kowalevskii sko-miR-4834 mature miRNA
Sequence 49 - ACAGCUGCUACGUGGAGUGGA - 69
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27