miRBase entry: sko-mir-4829a

Stem-loop sko-mir-4829a


Accession
MI0017569
Description
Saccoglossus kowalevskii sko-mir-4829a precursor miRNA


Sequence

uuauaaggaagucuuggcagguguagguagagagcacauucuuguuaucuuugaaagaaaUGUACUCUCUUCAAUGCCUGGCaaguuuuccuaauuaaca
.....((((((.((((.(((((((.((.((((((.((((((((.(((....)))))).))))).)))))))).))))))).)))).))))))........

Structure
---uuaua      u    g       a  u      c     -   g   u 
        aggaag cuug caggugu gg agagag acauu cuu uua c
        |||||| |||| ||||||| || |||||| ||||| ||| |||  
        uccuuu gaaC GUCCGUA CU UCUCUC UGUaa gaa agu u
acaauuaa      u    G       A  -      A     a   -   u 


Annotation confidence Not enough data
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Genome context
GL010720.1: 415686-415785 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-4829a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4829a

Accession MIMAT0020038
Description Saccoglossus kowalevskii sko-miR-4829a mature miRNA
Sequence 61 - UGUACUCUCUUCAAUGCCUGGC - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27