miRBase entry: sko-mir-4825

Stem-loop sko-mir-4825


Accession
MI0017563
Description
Saccoglossus kowalevskii sko-mir-4825 precursor miRNA


Sequence

guuucucugugguguugauaaGGGGACAGGGAUGGGUGUGGGGguuauaacagucgcaccUCACACCUUAACCUGUCAACUAUaucagcauuuacauaua
.......(((((((((((((((..((((((...((((((((((((.((....)).)).))))))))))...))))))..)).)))))))).)))))....

Structure
guuucuc     -        -  GG      GAU          -  u  a 
       ugugg uguugaua aG  GACAGG   GGGUGUGGGG gu au a
       ||||| |||||||| ||  ||||||   |||||||||| || ||  
       acauu acgacuaU UC  CUGUCC   UCCACACUcc cg ug c
---auau     u        A  AA      AAU          a  c  a 


Annotation confidence Not enough data
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Genome context
GL014245.1: 130730-130829 [-]

Database links

Mature sko-miR-4825-5p

Accession MIMAT0020030
Description Saccoglossus kowalevskii sko-miR-4825-5p mature miRNA
Sequence 22 - GGGGACAGGGAUGGGUGUGGGG - 43
Evidence experimental
454 [1]

Mature sko-miR-4825-3p

Accession MIMAT0020031
Description Saccoglossus kowalevskii sko-miR-4825-3p mature miRNA
Sequence 61 - UCACACCUUAACCUGUCAACUAU - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27