Stem-loop sequence sko-mir-4823

Accession

MI0017561 (change log)

Description

Saccoglossus kowalevskii miR-4823 stem-loop

Stem-loop

   -----uuucu     c a              c     ac  -u     gcg 
5'           uacau g cuugaguagacaau aacug  cg  agcgg   c
             ||||| | |||||||||||||| |||||  ||  |||||    
3'           augug c gagcuuaucuguug uugac  gc  uuguu   u
   ucuuauaugu     c c              u     ca  uu     aaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Skow_1.1; GCA_000003605.1): GL011189.1: 122830-122929 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir4823
• RNAcentral:URS000075AB1A_10224
• miRBase Tracker:MI0017561

Mature sequence sko-miR-4823-5p

• Accession: MIMAT0020027
• Previous IDs: sko-miR-4823*
• Sequence: 16 - ugaguagacaaucaacugaccg - 37
• Evidence: experimental; 454 [1]

Mature sequence sko-miR-4823-3p

• Accession: MIMAT0020028
• Previous IDs: sko-miR-4823
• Sequence: 61 - accaguuuguugucuauucga - 81
• Evidence: experimental; 454 [1]

References

1. PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).