Stem-loop sko-mir-4822

Accession

MI0017560

Description

Saccoglossus kowalevskii sko-mir-4822 precursor miRNA

Sequence

gauugUACCAUUGUUUUCAGUGUGAaaauguaaauugauaagUCUCACAUUGCUGACAAUGGUAuguuuuucu
....(((((((((((..((((((((...(((......)))....))))))))..)))))))))))........

Structure

----gauu           UU        -aaa   aa 
        gUACCAUUGUU  CAGUGUGA    ugu  a
        |||||||||||  ||||||||    |||   
        uAUGGUAACAG  GUUACACU    aua  u
ucuuuuug           UC        CUga   gu 

Annotation confidence Not enough data

Genome context

GL015953.1: 274883-274955 [+]

Mature sko-miR-4822-5p

• Accession: MIMAT0020025
• Description: Saccoglossus kowalevskii sko-miR-4822-5p mature miRNA
• Sequence: 6 - UACCAUUGUUUUCAGUGUGA - 25
• Evidence: experimental ; 454 [1]

Mature sko-miR-4822-3p

• Accession: MIMAT0020026
• Description: Saccoglossus kowalevskii sko-miR-4822-3p mature miRNA
• Sequence: 43 - UCUCACAUUGCUGACAAUGGUA - 64
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27