Stem-loop sequence sko-mir-2007

Accession

MI0017559 (change log)

Description

Saccoglossus kowalevskii miR-2007 stem-loop

Stem-loop

   -ugugu     gc    a           c  uu       u    uuu  u 
5'       gcguu  guug uguauuucagg gu  auacugg gaug   gu a
         |||||  |||| ||||||||||| ||  ||||||| ||||   ||  
3'       cguaa  caac auauaaagucc ca  ugugacc cuau   ca u
   cagauu     -a    c           a  --       u    --u  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Skow_1.1; GCA_000003605.1): GL016937.1: 82896-82995 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir2007
• RNAcentral:URS000075DCBD_10224
• miRBase Tracker:MI0017559

Mature sequence sko-miR-2007-5p

• Accession: MIMAT0020023
• Previous IDs: sko-miR-2007
• Sequence: 20 - uauuucaggcguuuauacugguga - 43
• Evidence: experimental; 454 [1]

Mature sequence sko-miR-2007-3p

• Accession: MIMAT0020024
• Previous IDs: sko-miR-2007*
• Sequence: 62 - uccaguguacaccugaaauau - 82
• Evidence: experimental; 454 [1]

References

1. PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).