miRBase entry: sko-mir-4819

Stem-loop sko-mir-4819


Accession
MI0017556
Description
Saccoglossus kowalevskii sko-mir-4819 precursor miRNA


Sequence

aucauguauguguugcccccACUUGGACAAAAUGGAUGCGACgaguacaaggccuCGCGUCAGUUUUGUCCAUGCGGgggaguucuuuagcaacguugga
.......(((((((((((((.(.((((((((((.(((((((.(.((.....)))))))))).)))))))))).).))))).......)))).))))....

Structure
aucaugu    -    -------     A U          G       C a  a 
       augu guug       ccccc C UGGACAAAAU GAUGCGA g gu c
       |||| ||||       ||||| | |||||||||| ||||||| | || a
       ugca cgau       gggGG G ACCUGUUUUG CUGCGCu c cg a
---aggu    a    uucuuga     C U          A       - -  g 


Annotation confidence Not enough data
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Genome context
GL010822.1: 246687-246786 [+]

Database links

Mature sko-miR-4819-5p

Accession MIMAT0020019
Description Saccoglossus kowalevskii sko-miR-4819-5p mature miRNA
Sequence 21 - ACUUGGACAAAAUGGAUGCGAC - 42
Evidence experimental
454 [1]

Mature sko-miR-4819-3p

Accession MIMAT0020020
Description Saccoglossus kowalevskii sko-miR-4819-3p mature miRNA
Sequence 56 - CGCGUCAGUUUUGUCCAUGCGG - 77
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27