miRBase entry: sko-mir-4818f

Stem-loop sko-mir-4818f


Accession
MI0017554
Description
Saccoglossus kowalevskii sko-mir-4818f precursor miRNA


Sequence

ucgcuucaguacacaguguguauccuugguaucaugugcauauagguuuaauaagugauccCAUUGCACAUGAUAGUGGGGCUacaagcuguggcaauacugc
......(((((((((((.((((.(((((.(((((((((((....((((........))))....))))))))))).))))).)))).))))))....))))).

Structure
ucgcuu     ----      g    u     g           uaua    uaa 
      cagua    cacagu ugua ccuug uaucaugugca    gguu   u
      |||||    |||||| |||| ||||| |||||||||||    ||||    
      gucau    gugucg acaU GGGGU AUAGUACACGU    cuag   a
-----c     aacg      a    C     G           UACc    uga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL015416.1: 63295-63397 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from sko-mir-4818f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4818f

Accession MIMAT0020016
Description Saccoglossus kowalevskii sko-miR-4818f mature miRNA
Sequence 62 - CAUUGCACAUGAUAGUGGGGCU - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27