miRNA Entry for MI0017554

Stem-loop sequence sko-mir-4818f

Accession

Description

Saccoglossus kowalevskii miR-4818f stem-loop

Stem-loop

   ucgcuu     ----      g    u     g           uaua    uaa 
5'       cagua    cacagu ugua ccuug uaucaugugca    gguu   u
         |||||    |||||| |||| ||||| |||||||||||    ||||    
3'       gucau    gugucg acau ggggu auaguacacgu    cuag   a
   -----c     aacg      a    c     g           uacc    uga

Get sequence

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (Skow_1.1; GCA_000003605.1)	Overlapping transcripts
GL015416.1: 63295-63397 [-]	intergenic

Clustered miRNAs

< 10kb from sko-mir-4818f
sko-mir-4818c	GL015416.1: 65470-65568 [-]
sko-mir-4818a	GL015416.1: 65099-65176 [-]
sko-mir-4818d	GL015416.1: 64657-64757 [-]
sko-mir-4818g	GL015416.1: 64531-64631 [-]
sko-mir-4818b	GL015416.1: 64345-64436 [-]
sko-mir-4818e	GL015416.1: 63398-63498 [-]
sko-mir-4818f	GL015416.1: 63295-63397 [-]

Database links

EntrezGene:Mir4818f
miRBase Tracker:MI0017554

Mature sequence sko-miR-4818f
Accession	MIMAT0020016
Sequence	62 - cauugcacaugauaguggggcu - 83 Get sequence
Evidence	experimental; 454 [1]

References
1	PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).

miRBase

Stem-loop sequence sko-mir-4818f

Mature sequence sko-miR-4818f

References