miRBase entry: sko-mir-4818c

Stem-loop sko-mir-4818c


Accession
MI0017551
Description
Saccoglossus kowalevskii sko-mir-4818c precursor miRNA


Sequence

caagaaaaucuguuguguggaacgccacuggauugcgcaauuaguuaaguaauugaucuAAUUGCACUUUACAGUGGUGUUcuaaucuccagccuauca
...((....(((..(..(((((((((((((....(.((((((((((((....)))).)))))))).)....)))))))))))))..)..)))....)).

Structure
caa  aaau   uu ug             gauu c        -    g 
   ga    cug  g  uggaacgccacug    g gcaauuag uuaa u
   ||    |||  |  |||||||||||||    | |||||||| ||||  
   cu    gac  c  aucUUGUGGUGAC    C CGUUAAuc aguu a
--a  aucc   cu ua             AUUU A        u    a 


Annotation confidence Not enough data
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Genome context
GL015416.1: 65470-65568 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from sko-mir-4818c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4818c

Accession MIMAT0020012
Description Saccoglossus kowalevskii sko-miR-4818c mature miRNA
Sequence 60 - AAUUGCACUUUACAGUGGUGUU - 81
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27