miRNA Entry for MI0017550

Stem-loop sequence sko-mir-4818b

Accession

Description

Saccoglossus kowalevskii miR-4818b stem-loop

Stem-loop

   ugu           c         c c        ga    ugau 
5'    uaauacauaug agccucacu u aagugcaa  ggau    c
      ||||||||||| ||||||||| | ||||||||  ||||    a
3'    auuaugugugu ucgggguga a uucacguu  ccug    c
   guu           u         u a        -a    uagu

Get sequence

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (Skow_1.1; GCA_000003605.1)	Overlapping transcripts
GL015416.1: 64345-64436 [-]	intergenic

Clustered miRNAs

< 10kb from sko-mir-4818b
sko-mir-4818c	GL015416.1: 65470-65568 [-]
sko-mir-4818a	GL015416.1: 65099-65176 [-]
sko-mir-4818d	GL015416.1: 64657-64757 [-]
sko-mir-4818g	GL015416.1: 64531-64631 [-]
sko-mir-4818b	GL015416.1: 64345-64436 [-]
sko-mir-4818e	GL015416.1: 63398-63498 [-]
sko-mir-4818f	GL015416.1: 63295-63397 [-]

Database links

EntrezGene:Mir4818b
RNAcentral:URS000075A410_10224
miRBase Tracker:MI0017550

Mature sequence sko-miR-4818b-5p
Accession	MIMAT0020010
Previous IDs	sko-miR-4818b*
Sequence	18 - ccucacucucaagugcaagagg - 39 Get sequence
Evidence	experimental; 454 [1]

Mature sequence sko-miR-4818b-3p
Accession	MIMAT0020011
Previous IDs	sko-miR-4818b
Sequence	56 - cauugcacuuaauaguggggc - 76 Get sequence
Evidence	experimental; 454 [1]

References
1	PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).

miRBase

Stem-loop sequence sko-mir-4818b

Mature sequence sko-miR-4818b-5p

Mature sequence sko-miR-4818b-3p

References