miRBase entry: sko-mir-4818a

Stem-loop sko-mir-4818a


Accession
MI0017549
Description
Saccoglossus kowalevskii sko-mir-4818a precursor miRNA


Sequence

ggguggacccucucaauggagaguaaauuggcaauugucgacaucuaAUUGCACUUCAUUGUGGGGCUUcaaacuauc
(..((((.((((.((((((((.((((.(((((....))))).......)))).)))))))).)))).))))..)....

Structure
---- gg    c    u        a    ------a     a 
    g  ugga ccuc caauggag guaa       uuggc a
    |  |||| |||| |||||||| ||||       |||||  
    c  acUU GGGG GUUACUUC CGUU       agcug u
cuau aa    C    U        A    Aaucuac     u 


Annotation confidence Not enough data
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Genome context
GL015416.1: 65099-65176 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from sko-mir-4818a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4818a

Accession MIMAT0020009
Description Saccoglossus kowalevskii sko-miR-4818a mature miRNA
Sequence 48 - AUUGCACUUCAUUGUGGGGCUU - 69
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27