miRBase entry: cel-mir-4810a

Stem-loop cel-mir-4810a


Accession
MI0017540
Description
Caenorhabditis elegans cel-mir-4810a precursor miRNA


Sequence

38 reads, 3 reads per million, 11 experiments
guaaguucaugaguucucuuauaaaaagguuuuuaUGAGUAUCGCAUCAACUUACAG
(((((((.(((.(....(((((((((....)))))))))...).))).)))))))..

Structure
--       c   a uucu         a 
  guaaguu aug g    cuuauaaaa g
  ||||||| ||| |    |||||||||  
  CAUUCAA UAC C    GAGUauuuu g
GA       C   G -UAU         u 


Annotation confidence Not enough data
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Genome context
chrX: 1875738-1875794 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from cel-mir-4810a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cel-miR-4810a

Accession MIMAT0019995
Description Caenorhabditis elegans cel-miR-4810a mature miRNA
Sequence 36 - UGAGUAUCGCAUCAACUUACAG - 57
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21085120
    Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs
    "Jan CH, Friedman RC, Ruby JG, Bartel DP"
    "Nature (2011) 469:97-101