Stem-loop tcc-MIR171g

Accession

MI0017495

Description

Theobroma cacao tcc-MIR171g precursor miRNA

Gene family

MIPF0000030; MIR171_1

Sequence

gauuucuuaguugaaaauuugauguuggcacgguucaaucggaucaaaucucucaguggcugaguccuuuagucUGAUUGAGCCGUGCCAAUAUCacauucagucacugcaucgg
.......((((.((.(((.(((((((((((((((((((((((((.(((...(((((...)))))...))).))))))))))))))))))))))))).)))...))))))......

Structure

gauuucu    u  --a   u                         c   ucu     u 
       uagu ga   aau ugauguuggcacgguucaaucggau aaa   cucag  
       |||| ||   ||| ||||||||||||||||||||||||| |||   ||||| g
       guca cu   uua aCUAUAACCGUGCCGAGUUAGUcug uuu   gaguc  
-ggcuac    -  gac   c                         a   ccu     g 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR171g

• Accession: MIMAT0020411
• Description: Theobroma cacao tcc-miR171g mature miRNA
• Sequence: 75 - UGAUUGAGCCGUGCCAAUAUC - 95
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108