Stem-loop tcc-MIR169i

Accession

MI0017483

Description

Theobroma cacao tcc-MIR169i precursor miRNA

Gene family

MIPF0000012; MIR169_1

Sequence

aagauaagaguucuguuuggUAGCCAAGGAUGAGUUGCCUGcuccuuccaagagguuucaaaucuuguuggguugccaggcauucaccuuggcuaacuugacuggcucuuuucuu
((((.(((((((..(((.(((((((((((.(((((.((((((....(((((.(((........))).)))))..).)))))))))))))))))).))).))).))))))).))))

Structure

    u       cu   u   -        A     U     - uccu     g   uuu 
aaga aagaguu  guu ggU AGCCAAGG UGAGU GCCUG c    uccaa agg   c
|||| |||||||  ||| ||| |||||||| ||||| ||||| |    ||||| |||    
uucu uucucgg  cag uca ucgguucc acuua cggac g    ggguu uuc   a
    u       -u   u   a        -     -     c --uu     g   uaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR169i

• Accession: MIMAT0020399
• Description: Theobroma cacao tcc-miR169i mature miRNA
• Sequence: 21 - UAGCCAAGGAUGAGUUGCCUG - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108