Stem-loop tcc-MIR167c

Accession

MI0017473

Description

Theobroma cacao tcc-MIR167c precursor miRNA

Gene family

MIPF0000023; MIR167_1

Sequence

uauggugcuccaccaucaguUGAAGCUGCCAGCAUGAUCUUaauuuuccuucuuuuuaucaaggaaagaucagaucauauggcaguuucaccuguugcugcuugcacaaucc
....((((..((.((.(((.(((((((((((..(((((((...((((((((.........))))))))...))))))).))))))))))).))).)).))...)))).....

Structure

-uaug    -uc  c  u   u           GC       Uaa        cuu 
     gugc   ca ca cag UGAAGCUGCCA  AUGAUCU   uuuuccuu   u
     ||||   || || ||| |||||||||||  |||||||   ||||||||   u
     cacg   gu gu guc acuuugacggu  uacuaga   gaaaggaa   u
ccuaa    uuc  c  u   c           -a       cua        cua 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR167c

• Accession: MIMAT0020389
• Description: Theobroma cacao tcc-miR167c mature miRNA
• Sequence: 21 - UGAAGCUGCCAGCAUGAUCUU - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108