miRBase entry: pma-mir-4628

Stem-loop pma-mir-4628


Accession
MI0017239
Description
Petromyzon marinus pma-mir-4628 precursor miRNA


Sequence

ggcaguacaggguguuucaaaaagaugggcccgauuuuaaaucgcuauaucucugcaauuGGGUCCAUCGUCUUGAAAUACCuuguauuucc
((.(((((((((((((((((...(((((((((((((.......((.........)))))))))))))))...))))))))))))))))).))

Structure
  c                 aaa             uuaaauc  uau 
gg aguacaggguguuucaa   gaugggcccgauu       gc   a
|| |||||||||||||||||   |||||||||||||       ||   u
cc uuauguuCCAUAAAGUU   CUACCUGGGuuaa       cg   c
  u                 CUG             -------  ucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-4628

Accession MIMAT0019662
Description Petromyzon marinus pma-miR-4628 mature miRNA
Sequence 61 - GGGUCCAUCGUCUUGAAAUACC - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383