miRBase entry: pma-mir-4621

Stem-loop pma-mir-4621


Accession
MI0017232
Description
Petromyzon marinus pma-mir-4621 precursor miRNA


Sequence

ugucgguccacgugccuggcuugguacagugugaaauaaacaaccacuGUACCAAGCGAGUCAGACACGUGgacugacgc
.(((((((((((((.((((((((((((((((.............)))))))))))))....))).)))))))))))))..

Structure
-u             c   ----             ugaaa 
  gucgguccacgug cug    gcuugguacagug     u
  ||||||||||||| |||    |||||||||||||     a
  cagucagGUGCAC GAC    CGAACCAUGucac     a
cg             A   UGAG             caaca 


Annotation confidence Not enough data
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Genome context
GL479944.1: 10313-10392 [+]

Database links

Mature pma-miR-4621

Accession MIMAT0019655
Description Petromyzon marinus pma-miR-4621 mature miRNA
Sequence 49 - GUACCAAGCGAGUCAGACACGUG - 71
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383