miRBase entry: pma-mir-4590

Stem-loop pma-mir-4590


Accession
MI0017200
Description
Petromyzon marinus pma-mir-4590 precursor miRNA


Sequence

gccgugggcccguggggcgguucgcacgcuccaucuggacgggagacaacACGGGGGAGUGGGGCCACCUGCgcguguccauccc
...((((((.(((((((.(((((...((((((.((((....(....)....))))))))))))))).))).)))).))))))...

Structure
gcc      c    -   c     gca      a    gacg g 
   gugggc cgug ggg gguuc   cgcucc ucug    g a
   |||||| |||| ||| |||||   |||||| ||||    |  
   uaccug gcgC UCC CCGGG   GUGAGG GGGC    c g
ccc      u    G   A     ---      -    Acaa a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-4590

Accession MIMAT0019623
Description Petromyzon marinus pma-miR-4590 mature miRNA
Sequence 51 - ACGGGGGAGUGGGGCCACCUGC - 72
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383