miRBase entry: pma-mir-4589

Stem-loop pma-mir-4589


Accession
MI0017199
Description
Petromyzon marinus pma-mir-4589 precursor miRNA


Sequence

guuugcugcugguaguggugcugcugugauugcuguuacugccgugcaggguguuGUGGGGUAAUGGUGGAGUACAgugcgguagugugg
....(((((((.((.((.((((.(..(.((((((..(((.(((......)))...))).)))))).).).)))))).)))))))))....

Structure
guuu       g  g  g    g ug g      gu   --u   gu 
    gcugcug ua ug ugcu c  u auugcu  uac   gcc  g
    ||||||| || || |||| |  | ||||||  |||   |||   
    ugauggc gu AC AUGA G  G UAAUGG  GUG   ugg  c
ggug       -  g  -    G -U G      -G   uug   ga 


Annotation confidence Not enough data
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Genome context
GL477204.1: 77670-77759 [+]

Database links

Mature pma-miR-4589

Accession MIMAT0019622
Description Petromyzon marinus pma-miR-4589 mature miRNA
Sequence 56 - GUGGGGUAAUGGUGGAGUACA - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383