miRBase entry: pma-mir-4577

Stem-loop pma-mir-4577


Accession
MI0017187
Description
Petromyzon marinus pma-mir-4577 precursor miRNA


Sequence

caaagcucaccguuugcuugguggcccacagauguucaucucuGGCGUGGAGACCGAAAGCGAACGgcugcugca
....((.(((((((((((((((..(((.((((........))))..).))..)))..)))))))))).))..)).

Structure
caaa  -u  -          --   gg  - -a    ugu 
    gc  ca ccguuugcuu  ggu  cc c  caga   u
    ||  || ||||||||||  |||  || |  ||||    
    cg  gu gGCAAGCGAA  CCA  GG G  Gucu   c
---a  uc  c          AG   GA  U CG    cua 


Annotation confidence Not enough data
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Genome context
GL477076.1: 80304-80378 [-]

Database links

Mature pma-miR-4577

Accession MIMAT0019610
Description Petromyzon marinus pma-miR-4577 mature miRNA
Sequence 44 - GGCGUGGAGACCGAAAGCGAACG - 66
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383