miRBase entry: pma-mir-4575

Stem-loop pma-mir-4575


Accession
MI0017185
Description
Petromyzon marinus pma-mir-4575 precursor miRNA


Sequence

acccgcacgaUGCAACCCCAAACAUUUUGGUUguggcuaacgacgaaccauaauauuugggcguucaagccugcgugcguga
...(((((((.(((((((((((.(((.(((((((.(....).)).))))).))).)))))).)))...)).).))))))...

Structure
acc      - U  ---   -      C   U     -  g c 
   cgcacg a GC   AAC CCCAAA AUU UGGUU gu g u
   |||||| | ||   ||| |||||| ||| ||||| || |  
   gcgugc u cg   uug ggguuu uaa accaa ca c a
agu      g c  aac   c      a   u     g  g a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-4575

Accession MIMAT0019608
Description Petromyzon marinus pma-miR-4575 mature miRNA
Sequence 11 - UGCAACCCCAAACAUUUUGGUU - 32
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383