miRBase entry: pma-mir-4563

Stem-loop pma-mir-4563


Accession
MI0017173
Description
Petromyzon marinus pma-mir-4563 precursor miRNA


Sequence

guuucccguugcuuUGCUGGACAACAAAGCACGGGUUCucucucagguaaccgcguugauguccugcaaagaaaucggacgc
.....(((...((((((.(((((.(((.((...((((.(((...))).)))))).))).))))).))))))....)))....

Structure
guuuc   -uug      U     A   A  ACG    C   c 
     ccg    cuuUGC GGACA CAA GC   GGUU ucu  
     |||    |||||| ||||| ||| ||   |||| ||| u
     ggc    gaaacg ccugu guu cg   ccaa gga  
-cgca   uaaa      u     a   g  ---    u   c 


Annotation confidence Not enough data
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Genome context
GL476637.1: 355081-355162 [+]

Database links

Mature pma-miR-4563

Accession MIMAT0019595
Description Petromyzon marinus pma-miR-4563 mature miRNA
Sequence 15 - UGCUGGACAACAAAGCACGGGUUC - 38
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383