miRBase entry: pma-mir-459

Stem-loop pma-mir-459


Accession
MI0017137
Description
Petromyzon marinus pma-mir-459 precursor miRNA


Sequence

gcacggcguggugugcUCAGUAACAUGGGUUCGAACCUCGcguugguucuccgccgagguuggcccugcguugcugugcacaaaacgucgac
...((((((..(((((.(((((((.((((..(.(((((((.((.((....))))))))))).).)))).))))))).)))))..))))))..

Structure
gca      gg     U       A    UU G       c  u  u 
   cggcgu  ugugc CAGUAAC UGGG  C AACCUCG gu gg u
   ||||||  ||||| ||||||| ||||  | ||||||| || ||  
   gcugca  acacg gucguug gucc  g uuggagc cg cc c
-ca      aa     u       c    -c g       -  -  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-459

Accession MIMAT0019555
Description Petromyzon marinus pma-miR-459 mature miRNA
Sequence 17 - UCAGUAACAUGGGUUCGAACCUCG - 40
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383