miRBase entry: pma-mir-430b

Stem-loop pma-mir-430b


Accession
MI0017131
Description
Petromyzon marinus pma-mir-430b precursor miRNA
Gene family
MIPF0000003; mir-430


Sequence

gucuguucacguucacaacaacuucgagcgcucugcuuaauauguugacuggCAAGAGCUUGAAUGUUGUUGUGAaugugagucagac
(((((((((((((((((((((((((((((.((.((((.............)))))).))))))).))))))))))))))))).)))))

Structure
     -                 -       g  c    uaaua 
gucug uucacguucacaacaac uucgagc cu ugcu     u
||||| ||||||||||||||||| ||||||| || ||||     g
cagac gaguguaAGUGUUGUUG AAGUUCG GA ACgg     u
     u                 U       A  -    ucagu 


Annotation confidence Not enough data
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Genome context
GL481024.1: 30645-30732 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pma-mir-430b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pma-miR-430b

Accession MIMAT0019549
Description Petromyzon marinus pma-miR-430b mature miRNA
Sequence 53 - CAAGAGCUUGAAUGUUGUUGUGA - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383