miRBase entry: pma-mir-204

Stem-loop pma-mir-204


Accession
MI0017106
Description
Petromyzon marinus pma-mir-204 precursor miRNA
Gene family
MIPF0000042; mir-204


Sequence

uggagggaUUCCCUUUGUCAUCCUAUGCCUguaaucgccucuaaGGCAAGGACAGCAAAGGGGACCccugu
...((((.((((((((((..((((.(((((.............)))))))))..)))))))))).))))..

Structure
ugg    a          CA    A     guaau 
   aggg UUCCCUUUGU  UCCU UGCCU     c
   |||| ||||||||||  |||| |||||     g
   uccC AGGGGAAACG  AGGA ACGGa     c
-ug    C          AC    -     aucuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-204-5p

Accession MIMAT0019515
Description Petromyzon marinus pma-miR-204-5p mature miRNA
Sequence 9 - UUCCCUUUGUCAUCCUAUGCCU - 30
Evidence experimental
454 [1]

Mature pma-miR-204-3p

Accession MIMAT0019516
Description Petromyzon marinus pma-miR-204-3p mature miRNA
Sequence 45 - GGCAAGGACAGCAAAGGGGACC - 66
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383