miRBase entry: pma-mir-203b

Stem-loop pma-mir-203b


Accession
MI0017105
Description
Petromyzon marinus pma-mir-203b precursor miRNA
Gene family
MIPF0000108; mir-203


Sequence

caugguuaccgagugcAGUGGUUCUAACCAGUUCAACAguucucuacugaaauuGUGAAAUGUUUAGGACCACUUGacucgguagcucca
...(((((((((((..(((((((((((.((.((((.(((((.((....))))))))))).)).)))))))))))..)))))))))))...

Structure
cau           gc           C  G    A     c  u 
   gguuaccgagu  AGUGGUUCUAA CA UUCA CAguu uc a
   |||||||||||  ||||||||||| || |||| ||||| ||  
   ucgauggcuca  UCACCAGGAUU GU AAGU Guuaa ag c
acc           GU           U  A    -     -  u 


Annotation confidence Not enough data
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Genome context
GL476390.1: 628538-628627 [+]

Database links

Mature pma-miR-203b-5p

Accession MIMAT0019513
Description Petromyzon marinus pma-miR-203b-5p mature miRNA
Sequence 17 - AGUGGUUCUAACCAGUUCAACA - 38
Evidence experimental
454 [1]

Mature pma-miR-203b-3p

Accession MIMAT0019514
Description Petromyzon marinus pma-miR-203b-3p mature miRNA
Sequence 55 - GUGAAAUGUUUAGGACCACUUG - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383