miRBase entry: pma-mir-190b

Stem-loop pma-mir-190b


Accession
MI0017095
Description
Petromyzon marinus pma-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

cuugcaagccacugucUGAUAUGUUUGGUAUAAGGUUGuuucaguaacaaucaACUGUAUAUCAAACAUAUGGUCacaguagcuugcuca
...((((((.(((((.(.((((((((((((((.(((((.............))))).)))))))))))))).)..))))).))))))...

Structure
cuu      c     -c G              A     uuuca 
   gcaagc acugu  U AUAUGUUUGGUAUA GGUUG     g
   |||||| |||||  | |||||||||||||| |||||     u
   cguucg ugaca  G UAUACAAACUAUAU UCAac     a
acu      a     CU G              G     uaaca 


Annotation confidence Not enough data
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Genome context
GL480176.1: 11232-11321 [+]

Database links

Mature pma-miR-190b-5p

Accession MIMAT0019495
Description Petromyzon marinus pma-miR-190b-5p mature miRNA
Sequence 17 - UGAUAUGUUUGGUAUAAGGUUG - 38
Evidence experimental
454 [1]

Mature pma-miR-190b-3p

Accession MIMAT0019496
Description Petromyzon marinus pma-miR-190b-3p mature miRNA
Sequence 54 - ACUGUAUAUCAAACAUAUGGUC - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383