miRBase entry: pma-mir-153-3

Stem-loop pma-mir-153-3


Accession
MI0017087
Description
Petromyzon marinus pma-mir-153-3 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

uggccgauaucauuuuugugaccugcagcuuguacccucgccgcccagUUGCAUAGUCACAAAAGUGAUCAUcggagg
...(((((((((((((((((((.(((((((.((.........))..)))))))..)))))))))))))).)))))...

Structure
ugg     -              -c       -u  acc 
   ccgau aucauuuuugugac  ugcagcu  gu   c
   ||||| ||||||||||||||  |||||||  ||   u
   ggcUA UAGUGAAAACACUG  ACGUUga  cg   c
gga     C              AU       cc  ccg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-153-3p

Accession MIMAT0019484
Description Petromyzon marinus pma-miR-153-3p mature miRNA
Sequence 49 - UUGCAUAGUCACAAAAGUGAUCAU - 72
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383