miRBase entry: pma-mir-140

Stem-loop pma-mir-140


Accession
MI0017077
Description
Petromyzon marinus pma-mir-140 precursor miRNA


Sequence

ucgaccgcuCAGUGGUUUUACCCUAUGGUAGcuuugaauggcagacucuaccacaugguagaaucacggcccggugac
...((((....(((((((((((...((((((.((((.....))))..))))))...)))))))))))....))))...

Structure
ucg    cuCA           CUA      -c    a 
   accg    GUGGUUUUACC   UGGUAG  uuug a
   ||||    |||||||||||   ||||||  |||| u
   uggc    cacuaagaugg   accauc  agac g
cag    ccgg           uac      uc    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-140

Accession MIMAT0019471
Description Petromyzon marinus pma-miR-140 mature miRNA
Sequence 10 - CAGUGGUUUUACCCUAUGGUAG - 31
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383