miRBase entry: pma-mir-135b

Stem-loop pma-mir-135b


Accession
MI0017072
Description
Petromyzon marinus pma-mir-135b precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

uccccgcguugUAUGGCUUUUUAUUCCUACGUGAucguaacgcacgcugagccucauguagggaggaaagccaugcaacgacgggug
..(((((((((((((((((((..(((((((((((((((.......)).))...))))))))))).))))))))))))))).))))..

Structure
uc    -               UA           ---  -  aa 
  cccg cguugUAUGGCUUUU  UUCCUACGUGA   uc gu  c
  |||| |||||||||||||||  |||||||||||   || ||  g
  gggc gcaacguaccgaaag  agggauguacu   ag cg  c
gu    a               -g           ccg  u  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-135b

Accession MIMAT0019465
Description Petromyzon marinus pma-miR-135b mature miRNA
Sequence 12 - UAUGGCUUUUUAUUCCUACGUGA - 34
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383