Stem-loop pma-mir-133b

Accession

MI0017070

Description

Petromyzon marinus pma-mir-133b precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

uggaaugccuugcuggCGCUGGUAAAAUGGAACCAAAUcaacauuucaacggcUUUGGUCCCCUUCAACCAGCUCuagauaagcauuaug
...(((((.(((((((.((((((..((.((.((((((((...........)).)))))).)).))..)))))).)))).))))))))...

Structure

ugg     c   -    C      AA  U  A      -  aaca 
   aaugc uug cugg GCUGGU  AA GG ACCAAA Uc    u
   ||||| ||| |||| ||||||  || || |||||| ||    u
   uuacg aau gauC CGACCA  UU CC UGGUUU gg    u
gua     -   a    U      AC  C  C      c  caac 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-133b-5p

• Accession: MIMAT0019461
• Description: Petromyzon marinus pma-miR-133b-5p mature miRNA
• Sequence: 17 - CGCUGGUAAAAUGGAACCAAAU - 38
• Evidence: experimental ; 454 [1]

Mature pma-miR-133b-3p

• Accession: MIMAT0019462
• Description: Petromyzon marinus pma-miR-133b-3p mature miRNA
• Sequence: 54 - UUUGGUCCCCUUCAACCAGCUC - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383