miRBase entry: pma-mir-30g

Stem-loop pma-mir-30g


Accession
MI0017046
Description
Petromyzon marinus pma-mir-30g precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

guuucagguggUGUAAACAUCCUUCACUCUCAGCugugagauggaagcacacugagaggagggguguugacaccagcugacuc
...((((.((((((.((((((((((.(((((((.((((.........))))))))))))))))))))).)))))).))))...

Structure
guu    g      A          A       C    aga 
   ucag uggUGU AACAUCCUUC CUCUCAG ugug   u
   |||| |||||| |||||||||| ||||||| ||||   g
   aguc accaca uuguggggag gagaguc acac   g
cuc    g      g          -       -    gaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-30g

Accession MIMAT0019431
Description Petromyzon marinus pma-miR-30g mature miRNA
Sequence 12 - UGUAAACAUCCUUCACUCUCAGC - 34
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383