miRBase entry: pma-mir-29b

Stem-loop pma-mir-29b


Accession
MI0017036
Description
Petromyzon marinus pma-mir-29b precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

cgacucgcgugaccgauuucccuugguguuuagauguggauguggucucUAGCACCAUUAGAAAUCGGUUAugcgggcg
((.(((((((((((((((((...(((((((.((((.........))))..)))))))...)))))))))))))))))))

Structure
  a                 ccu       -u    gug 
cg cucgcgugaccgauuuc   ugguguu  agau   g
|| |||||||||||||||||   |||||||  ||||   a
gc gggcguAUUGGCUAAAG   ACCACGA  ucug   u
  -                 AUU       Uc    gug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-29b

Accession MIMAT0019418
Description Petromyzon marinus pma-miR-29b mature miRNA
Sequence 50 - UAGCACCAUUAGAAAUCGGUUA - 71
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383