Stem-loop pma-mir-27b

Accession

MI0017034

Description

Petromyzon marinus pma-mir-27b precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

uccggugaAGGGCUUAACCCACCUGUGAGCAgcgcuuuacgauaagugUUCACAGUGGCUAAGUUCUGCaucugu
...((((.((((((((..((((.(((((...((((((......))))))))))))))).)))))))).))))...

Structure

ucc    a        AC    C     GCA      ua 
   ggug AGGGCUUA  CCAC UGUGA   gcgcuu  c
   |||| ||||||||  |||| |||||   ||||||   
   cuaC UCUUGAAU  GGUG ACACU   Ugugaa  g
ugu    G        -C    -     ---      ua 

Annotation confidence Not enough data

Genome context

GL477371.1: 165960-166034 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-27b

Mature pma-miR-27b-5p

• Accession: MIMAT0019414
• Description: Petromyzon marinus pma-miR-27b-5p mature miRNA
• Sequence: 9 - AGGGCUUAACCCACCUGUGAGCA - 31
• Evidence: experimental ; 454 [1]

Mature pma-miR-27b-3p

• Accession: MIMAT0019415
• Description: Petromyzon marinus pma-miR-27b-3p mature miRNA
• Sequence: 49 - UUCACAGUGGCUAAGUUCUGC - 69
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383