Stem-loop pma-mir-20b

Accession

MI0017023

Description

Petromyzon marinus pma-mir-20b precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

guugccucgccaggcgcCAAAGUGCUGAUAGUGCAGGUAGgcucccuugaugcgacuacugcauugugagcacuugcagcgccugggaggucau
...(((((.((((((((..(((((((.(((((((((.(((((((....)).))..)))))))))))).)))))))...)))))))))))))...

Structure

guu     g        -CA       G         G   --  -  c 
   gccuc ccaggcgc   AAGUGCU AUAGUGCAG UAG  gc uc c
   ||||| ||||||||   ||||||| ||||||||| |||  || ||  
   uggag gguccgcg   uucacga uguuacguc auc  cg ag u
uac     -        acg       g         -   ag  u  u 

Annotation confidence Not enough data

Genome context

GL496094.1: 2639-2732 [+]

Mature pma-miR-20b

• Accession: MIMAT0019397
• Description: Petromyzon marinus pma-miR-20b mature miRNA
• Sequence: 18 - CAAAGUGCUGAUAGUGCAGGUAG - 40
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383