miRBase entry: pma-mir-10b

Stem-loop pma-mir-10b


Accession
MI0017009
Description
Petromyzon marinus pma-mir-10b precursor miRNA


Sequence

cggcccggguccgcuUACCCUGUAGGUACGACCUUGCguguccacaaaaagguugcAAGGUUGUGACUACAGCGUACGcggccccgggaac
...((((((.((((.(((.((((((..(((((((((((...((.......)).)))))))))))..)))))).))).)))).))))))...

Structure
cgg      u    u   C      GU           ugu  ac 
   cccggg ccgc UAC CUGUAG  ACGACCUUGCg   cc  a
   |||||| |||| ||| ||||||  |||||||||||   ||  a
   gggccc ggcG AUG GACAUC  UGUUGGAAcgu   gg  a
caa      c    C   C      AG           --u  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-miR-10b-5p

Accession MIMAT0019376
Description Petromyzon marinus pma-miR-10b-5p mature miRNA
Sequence 16 - UACCCUGUAGGUACGACCUUGC - 37
Evidence experimental
454 [1]

Mature pma-miR-10b-3p

Accession MIMAT0019377
Description Petromyzon marinus pma-miR-10b-3p mature miRNA
Sequence 57 - AAGGUUGUGACUACAGCGUACG - 78
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383