Stem-loop sequence mmu-mir-28c

AccessionMI0016966 (change log)
Symbol MGI:Mir28c
DescriptionMus musculus miR-28c stem-loop
Gene family MIPF0000057; mir-28
Literature search

18 open access papers mention mmu-mir-28c
(139 sentences)

Stem-loop 
   uca    ---a   a   -    aaa    auauga   - ua 
5'    cugc    guu caa agac   ugag      ucc c  c
      ||||    ||| ||| ||||   ||||      ||| |  c
3'    gacg    caa guu ucug   acuc      agg g  c
   --c    aaca   -   a    -ac    -----g   a uu
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Deep sequencing
180184 reads, 646 reads per million, 107 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr15: 53614205-53614279 [-]
sense
OTTMUST00000086186 ; Samd12-004; intron 3
OTTMUST00000046537 ; Samd12-001; intron 4
OTTMUST00000046538 ; Samd12-002; intron 4
ENSMUST00000132059 ; Samd12-004; intron 3
ENSMUST00000154119 ; Samd12-002; intron 4
ENSMUST00000078673 ; Samd12-001; intron 4
Database links

Mature sequence mmu-miR-28c

Accession MIMAT0019339
Sequence

45 -  

aggagcucacagucuauuga

 - 64

Get sequence
Deep sequencing180184 reads, 107 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:20935160 "Next-generation sequencing identifies the natural killer cell microRNA transcriptome" Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER Genome Res. 20:1590-1604(2010).