Stem-loop mmu-mir-3960

Accession

MI0016963

Symbol

MGI: Mir3960

Description

Mus musculus mmu-mir-3960 precursor miRNA

Gene family

MIPF0001271; mir-3960

Literature search

8 open access papers mention mmu-mir-3960
(10 sentences)

Sequence

3 reads, 1 reads per million, 3 experiments

gccacggcuuccugcgcccccgaucggggccgccaacagcgcuggcGGCGGCGGCGGAGGCGGGGGcaguggc
(((((.((((((...(((.(((.(((..(((((((.......)))))))..)))))).))))))))).)))))

Structure

     g      ugc   c   a   gg       ac 
gccac gcuucc   gcc ccg ucg  gccgcca  a
||||| ||||||   ||| ||| |||  |||||||  g
cggug cGGGGG   CGG GGC GGC  CGGcggu  c
     a      ---   A   -   GG       cg 

Annotation confidence Not enough data

Genome context

chr2: 32712900-32712972 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-3960

Mature mmu-miR-3960

• Accession: MIMAT0019336
• Description: Mus musculus mmu-miR-3960 mature miRNA
• Sequence: 47 - GGCGGCGGCGGAGGCGGGGG - 66
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 21324897
   A Runx2/miR-3960/miR-2861 regulatory feedback loop during mouse osteoblast differentiation
   "Hu R, Liu W, Li H, Yang L, Chen C, Xia ZY, Guo LJ, Xie H, Zhou HD, Wu XP, Luo XH"
   "J Biol Chem (2011) 286:12328-12339