Stem-loop oar-mir-299

Accession

MI0016919

Description

Ovis aries oar-mir-299 precursor miRNA

Gene family

MIPF0000186; mir-299

Literature search

4 open access papers mention oar-mir-299
(4 sentences)

Sequence

5132 reads, 566 reads per million, 13 experiments

gaaaUGGUUUACCGUCCCACAUACAUucugaauaugUAUGUGGGACGGUAAACCACAAaag
....((((((((((((((((((((((.......))))))))))))))))))))))......

Structure

--gaaa                      uc 
      UGGUUUACCGUCCCACAUACAU  u
      ||||||||||||||||||||||  g
      ACCAAAUGGCAGGGUGUAUgua  a
gaaAAC                      ua 

Annotation confidence High

Genome context

chr18: 64523015-64523075 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from oar-mir-299

Mature oar-miR-299-5p

• Accession: MIMAT0019251
• Description: Ovis aries oar-miR-299-5p mature miRNA
• Sequence: 5 - UGGUUUACCGUCCCACAUACAU - 26
• Evidence: experimental ; Illumina [1]

Mature oar-miR-299-3p

• Accession: MIMAT0019252
• Description: Ovis aries oar-miR-299-3p mature miRNA
• Sequence: 37 - UAUGUGGGACGGUAAACCACAA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662