miRBase entry: hsa-mir-548aj-1

Stem-loop hsa-mir-548aj-1


Accession
MI0016814
Symbol
HGNC: MIR548AJ1
Description
Homo sapiens hsa-mir-548aj-1 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548aj-1
(170 sentences)

Sequence

629 reads, 26 reads per million, 31 experiments
auugguguaaaaguaauugcagguuaugccauuaaaaguaauggUAAAAACUGCAAUUACUUUUAcacuaac
.(((((((((((((((((((((..(.((((((((....)))))))).)..))))))))))))))))))))).

Structure
a                     gu a        a 
 uugguguaaaaguaauugcag  u ugccauua a
 |||||||||||||||||||||  | ||||||||  
 aaucacAUUUUCAUUAACGUC  A AUgguaau a
c                     AA A        g 


Annotation confidence Not enough data
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Genome context
chr6: 132115192-132115263 [-]

Database links

Mature hsa-miR-548aj-3p

Accession MIMAT0018990
Description Homo sapiens hsa-miR-548aj-3p mature miRNA
Sequence 45 - UAAAAACUGCAAUUACUUUUA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127