Stem-loop sequence hsa-mir-4443

Accession

MI0016786 (change log)

Symbol

HGNC:MIR4443

Description

Homo sapiens miR-4443 stem-loop

Literature search

6 open access papers mention hsa-mir-4443
(62 sentences)

Stem-loop

   - g g         --  c       u 
5'  g u gggguugga  gg guggguu u
    | | |||||||||  || |||||||  
3'  c a ucccgaucu  cc uauccaa a
   a g g         uu  c       g 

Deep sequencing

23422 reads, 873 reads per million, 157 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr3: 48196564-48196616 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4443
• HGNC:MIR4443
• RNAcentral:URS0000759B7F_9606
• miRBase Tracker:MI0016786

Mature sequence hsa-miR-4443

• Accession: MIMAT0018961
• Sequence: 9 - uuggaggcguggguuuu - 25
• Deep sequencing: 23418 reads, 157 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00004D84DB_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4443
  • TargetScanVert:hsa-miR-4443
  • miRDB:hsa-miR-4443

References

1. PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).