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miRBase |
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Stem-loop sequence csi-MIR167b |
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Accession | MI0016697 (change log) | ||||
Description | Citrus sinensis miR167b stem-loop | ||||
Gene family | MIPF0000023; MIR167_1 | ||||
Literature search |
4 open access papers mention csi-MIR167b | ||||
Stem-loop |
-------------a g - - uau a a - a u cuu 5' ucg gca cca c cag ugaagcugcc gcaugaucu ua c uuccuc u ||| ||| ||| | ||| |||||||||| ||||||||| || | |||||| 3' agc cgu ggu g guc acuuugacgg cguacuaga au g aaggag g gaccugagcauuaa a u u cuu c - c a u cuc |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence csi-miR167b-5p |
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Accession | MIMAT0018454 |
Sequence |
20 - ugaagcugccagcaugaucuu - 40 |
Evidence | experimental; Illumina [1-2] |
Mature sequence csi-miR167b-3p |
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Accession | MIMAT0037395 |
Sequence |
71 - agaucaugcggcaguuucacc - 91 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:20398412
"Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type"
BMC Genomics. 11:246(2010).
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2 |
PMID:28054378
"MicroRNA annotation of plant genomes - Do it right or not at all"
Bioessays. [Epub prior to print](2017).
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