miRBase entry: hsa-mir-3944

Stem-loop hsa-mir-3944


Accession
MI0016601
Symbol
HGNC: MIR3944
Description
Homo sapiens hsa-mir-3944 precursor miRNA


Sequence

224 reads, 16 reads per million, 33 experiments
uccacccagcaggcgcagguccUGUGCAGCAGGCCAACCGAGAagcgccugcgucucccauuUUCGGGCUGGCCUGCUGCUCCGGaccugugccugaucuuaaugcug
.........(((((((((((((.(.(((((((((((.((((((((((....)))......)))))))..))))))))))).).)))))))))))))............

Structure
---uccacccag             U U           -A       ------   c 
            caggcgcaggucc G GCAGCAGGCCA  CCGAGAa      gcg c
            ||||||||||||| | |||||||||||  |||||||      |||  
            guccguguccaGG C CGUCGUCCGGU  GGCUUuu      ugc u
gucguaauucua             C U           CG       acccuc   g 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr10: 133371556-133371663 [-]

Database links

Mature hsa-miR-3944-3p

Accession MIMAT0018360
Description Homo sapiens hsa-miR-3944-3p mature miRNA
Sequence 63 - UUCGGGCUGGCCUGCUGCUCCGG - 85
Evidence experimental
Illumina [1-2]

Mature hsa-miR-3944-5p

Accession MIMAT0019231
Description Homo sapiens hsa-miR-3944-5p mature miRNA
Sequence 23 - UGUGCAGCAGGCCAACCGAGA - 43
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20498841
    Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
    Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
    PLoS One (2010) 5:e10563

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86