miRBase entry: gma-MIR4393a

Stem-loop gma-MIR4393a


Accession
MI0016549
Description
Glycine max gma-MIR4393a precursor miRNA


Sequence

cugacuucucugcugucccuuucccagcugucccuugaaaaucacacaguuuuaaaauugaaucacaaaauuaaauauuaacacaacuacauggacgacacagggacaguUGAGAAAAGGACGGCAGAAAAGCCaa
.((.(((.((((((((((.((((.(((((((((((((....(((...((((((((.(((.(((......))).))).))))...))))...)))....)).))))))))))).)))).)))))))))).))).)).

Structure
c  a   c          c    c           -  aaaa   cac    ---    a   g   ca 
 ug cuu ucugcugucc uuuc cagcugucccu ug    uca   aguu   uuaa auu aau  c
 || ||| |||||||||| |||| ||||||||||| ||    |||   ||||   |||| ||| |||   
 aC GAA AGACGGCAGG AAAG GUugacaggga ac    ggu   ucaa   aauu uaa uua  a
a  C   A          A    A           c  agca   aca    cac    a   a   aa 


Annotation confidence Not enough data
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Genome context
chr10: 1366374-1366509 [-]

Database links

Mature gma-miR4393a

Accession MIMAT0018308
Description Glycine max gma-miR4393a mature miRNA
Sequence 111 - UGAGAAAAGGACGGCAGAAAAGCC - 134
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14